William Gmeiner to Nucleic Acid Conformation
This is a "connection" page, showing publications William Gmeiner has written about Nucleic Acid Conformation.
Connection Strength
2.032
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Mao XA, Gmeiner WH. NMR study of the folding-unfolding mechanism for the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG). Biophys Chem. 2005 Feb 01; 113(2):155-60.
Score: 0.257
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Gmeiner WH. Antimetabolite incorporation into DNA: structural and thermodynamic basis for anticancer activity. Biopolymers. 2002 Nov 05; 65(3):180-9.
Score: 0.220
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Gmeiner WH, Konerding D, James TL. Effect of cytarabine on the NMR structure of a model okazaki fragment from the SV40 genome. Biochemistry. 1999 Jan 26; 38(4):1166-75.
Score: 0.169
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Ghosh S, Mallick S, Das U, Verma A, Pal U, Chatterjee S, Nandy A, Saha KD, Maiti NC, Baishya B, Suresh Kumar G, Gmeiner WH. Curcumin stably interacts with DNA hairpin through minor groove binding and demonstrates enhanced cytotoxicity in combination with FdU nucleotides. Biochim Biophys Acta Gen Subj. 2018 Mar; 1862(3):485-494.
Score: 0.155
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Sahasrabudhe PV, Gmeiner WH. Solution structures of 5-fluorouracil-substituted RNA duplexes containing G-U wobble base pairs. Biochemistry. 1997 May 20; 36(20):5981-91.
Score: 0.151
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Sahasrabudhe PV, Sun J, Gmeiner WH. The 5' stem-loop from human U4 snRNA adopts a novel conformation stabilized by G-C and G-U base pairs. J Biomol Struct Dyn. 1997 Apr; 14(5):567-77.
Score: 0.149
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Sahasrabudhe PV, Pon RT, Gmeiner WH. Solution structures of 5-fluorouracil-substituted DNA and RNA decamer duplexes. Biochemistry. 1996 Oct 22; 35(42):13597-608.
Score: 0.145
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Ghosh S, Salsbury FR, Horita DA, Gmeiner WH. Cooperative stabilization of Zn(2+):DNA complexes through netropsin binding in the minor groove of FdU-substituted DNA. J Biomol Struct Dyn. 2013; 31(11):1301-10.
Score: 0.110
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Ghosh S, Salsbury FR, Horita DA, Gmeiner WH. Zn2+ selectively stabilizes FdU-substituted DNA through a unique major groove binding motif. Nucleic Acids Res. 2011 May; 39(10):4490-8.
Score: 0.097
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Olsen CM, Gmeiner WH, Marky LA. Unfolding of G-quadruplexes: energetic, and ion and water contributions of G-quartet stacking. J Phys Chem B. 2006 Apr 06; 110(13):6962-9.
Score: 0.070
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Comolli LR, Ulyanov NB, Soto AM, Marky LA, James TL, Gmeiner WH. NMR structure of the 3' stem-loop from human U4 snRNA. Nucleic Acids Res. 2002 Oct 15; 30(20):4371-9.
Score: 0.055
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Gmeiner WH. The structure and dynamics of the U4/U6 snRNP: implications for pre-mRNA splicing and use as a model system to investigate the RNA-mediated effects of (5F)Ura. J Biomol Struct Dyn. 2002 Apr; 19(5):853-62.
Score: 0.053
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Konerding D, James TL, Trump E, Soto AM, Marky LA, Gmeiner WH. NMR structure of a gemcitabine-substituted model Okazaki fragment. Biochemistry. 2002 Jan 22; 41(3):839-46.
Score: 0.052
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Guo J, Daizadeh I, Gmeiner WH. Structure of the Sm binding site from human U4 snRNA derived from a 3 ns PME molecular dynamics simulation. J Biomol Struct Dyn. 2000 Dec; 18(3):335-44.
Score: 0.048
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Gmeiner WH, Hudalla CJ, Soto AM, Marky L. Binding of ethidium to DNA measured using a 2D diffusion-modulated gradient COSY NMR experiment. FEBS Lett. 2000 Jan 14; 465(2-3):148-52.
Score: 0.045
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Gmeiner WH, Cui W, Konerding DE, Keifer PA, Sharma SK, Soto AM, Marky LA, Lown JW. Shape-selective recognition of a model Okazaki fragment by geometrically-constrained bis-distamycins. J Biomol Struct Dyn. 1999 Dec; 17(3):507-18.
Score: 0.045
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Melvin RL, Gmeiner WH, Salsbury FR. All-atom MD indicates ion-dependent behavior of therapeutic DNA polymer. Phys Chem Chem Phys. 2017 Aug 23; 19(33):22363-22374.
Score: 0.038
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Melvin RL, Gmeiner WH, Salsbury FR. All-Atom MD Predicts Magnesium-Induced Hairpin in Chemically Perturbed RNA Analog of F10 Therapeutic. J Phys Chem B. 2017 08 24; 121(33):7803-7812.
Score: 0.038
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Sahasrabudhe PV, Gmeiner WH. The affinity of an oligodeoxynucleotide-peptide conjugate for an RNA hairpin loop depends on stereochemistry at the DNA-peptide junction. J Biomol Struct Dyn. 1996 Feb; 13(4):585-91.
Score: 0.034
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Sahasrabudhe PV, Pon RT, Gmeiner WH. Effects of site-specific substitution of 5-fluorouridine on the stabilities of duplex DNA and RNA. Nucleic Acids Res. 1995 Oct 11; 23(19):3916-21.
Score: 0.034
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Gmeiner WH, Rayner B, Morvan F, Imbach JL, Lown JW. Structure and conformation in solution of the parallel-stranded hybrid alpha-d(CGCAATTCGC).beta-d(GCGTTAAGCG) by high-resolution 2D NMR. J Biomol NMR. 1992 May; 2(3):275-88.
Score: 0.027
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Gmeiner WH, Rao KE, Rayner B, Vasseur JJ, Morvan F, Imbach JL, Lown JW. Polarity of annealing and structural analysis of the RNase H resistant alpha-5'-d[TACACA].beta-5'-r[AUGUGU] hybrid determined by high-field 1H, 13C, and 31P NMR analysis. Biochemistry. 1990 Nov 13; 29(45):10329-41.
Score: 0.024
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Soto AM, Gmeiner WH, Marky LA. Energetic and conformational contributions to the stability of Okazaki fragments. Biochemistry. 2002 May 28; 41(21):6842-9.
Score: 0.013