Loading...
Header Logo
Keywords
Last Name

Umit Topaloglu, Ph.D.

TitleAssociate Professor
InstitutionWake Forest School of Medicine
DepartmentCancer Biology
Address
vCardDownload vCard
    Other Positions
    TitleAssociate Professor
    InstitutionWake Forest School of Medicine
    DepartmentBiostatistical Sciences


    Collapse Bibliographic 
    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
    List All   |   Timeline
    1. Diaz-Garelli JF, Strowd R, Wells BJ, Ahmed T, Merrill R, Topaloglu U. Lost in Translation: Diagnosis Records Show More Inaccuracies After Biopsy in Oncology Care EHRs. AMIA Jt Summits Transl Sci Proc. 2019; 2019:325-334. PMID: 31258985.
      View in: PubMed
    2. Song Q, Hawkins GA, Wudel L, Chou PC, Forbes E, Pullikuth AK, Liu L, Jin G, Craddock L, Topaloglu U, Kucera G, O'Neill S, Levine EA, Sun P, Watabe K, Lu Y, Alexander-Miller MA, Pasche B, Miller LD, Zhang W. Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq. Cancer Med. 2019 Jun; 8(6):3072-3085. PMID: 31033233.
      View in: PubMed
    3. Guan M, Cho S, Petro R, Zhang W, Pasche B, Topaloglu U. Natural language processing and recurrent network models for identifying genomic mutation-associated cancer treatment change from patient progress notes. JAMIA Open. 2019 Apr; 2(1):139-149. PMID: 30944913.
      View in: PubMed
    4. Topaloglu U, Palchuk MB. Using a Federated Network of Real-World Data to Optimize Clinical Trials Operations. JCO Clin Cancer Inform. 2018 12; 2:1-10. PMID: 30652541.
      View in: PubMed
    5. Xiao TG, Weis JA, Gayzik FS, Thomas A, Chiba A, Gurcan MN, Topaloglu U, Samykutty A, McNally LR. Applying dynamic contrast enhanced MSOT imaging to intratumoral pharmacokinetic modeling. Photoacoustics. 2018 Sep; 11:28-35. PMID: 30105204.
      View in: PubMed
    6. Diaz-Garelli JF, Wells BJ, Yelton C, Strowd R, Topaloglu U. Biopsy Records Do Not Reduce Diagnosis Variability in Cancer Patient EHRs: Are We More Uncertain After Knowing? AMIA Jt Summits Transl Sci Proc. 2018; 2017:72-80. PMID: 29888044.
      View in: PubMed
    7. Mancone S, Lycan T, Ahmed T, Topaloglu U, Dothard A, Petty WJ, Strowd RE. Severe neurologic complications of immune checkpoint inhibitors: a single-center review. J Neurol. 2018 Jul; 265(7):1636-1642. PMID: 29761297.
      View in: PubMed
    8. Liu L, Ruiz J, O'Neill SS, Grant SC, Petty WJ, Yang M, Chen K, Topaloglu U, Pasche B, Zhang W. Favorable outcome of patients with lung adenocarcinoma harboring POLE mutations and expressing high PD-L1. Mol Cancer. 2018 04 12; 17(1):81. PMID: 29650000.
      View in: PubMed
    9. Yang M, Forbes ME, Bitting RL, O'Neill SS, Chou PC, Topaloglu U, Miller LD, Hawkins GA, Grant SC, DeYoung BR, Petty WJ, Chen K, Pasche BC, Zhang W. Incorporating blood-based liquid biopsy information into cancer staging: time for a TNMB system? Ann Oncol. 2018 02 01; 29(2):311-323. PMID: 29216340.
      View in: PubMed
    10. Kytola V, Topaloglu U, Miller LD, Bitting RL, Goodman MM, D Agostino RB, Desnoyers RJ, Albright C, Yacoub G, Qasem SA, DeYoung B, Thorsson V, Shmulevich I, Yang M, Shcherban A, Pagni M, Liu L, Nykter M, Chen K, Hawkins GA, Grant SC, Petty WJ, Alistar AT, Levine EA, Staren ED, Langefeld CD, Miller V, Singal G, Petro RM, Robinson M, Blackstock W, Powell BL, Wagner LI, Foley KL, Abraham E, Pasche B, Zhang W. Mutational Landscapes of Smoking-Related Cancers in Caucasians and African Americans: Precision Oncology Perspectives at Wake Forest Baptist Comprehensive Cancer Center. Theranostics. 2017; 7(11):2914-2923. PMID: 28824725.
      View in: PubMed
    11. Alistar A, Morris BB, Desnoyer R, Klepin HD, Hosseinzadeh K, Clark C, Cameron A, Leyendecker J, D'Agostino R, Topaloglu U, Boteju LW, Boteju AR, Shorr R, Zachar Z, Bingham PM, Ahmed T, Crane S, Shah R, Migliano JJ, Pardee TS, Miller L, Hawkins G, Jin G, Zhang W, Pasche B. Safety and tolerability of the first-in-class agent CPI-613 in combination with modified FOLFIRINOX in patients with metastatic pancreatic cancer: a single-centre, open-label, dose-escalation, phase 1 trial. Lancet Oncol. 2017 06; 18(6):770-778. PMID: 28495639.
      View in: PubMed
    12. Yang M, Topaloglu U, Petty WJ, Pagni M, Foley KL, Grant SC, Robinson M, Bitting RL, Thomas A, Alistar AT, Desnoyers RJ, Goodman M, Albright C, Porosnicu M, Vatca M, Qasem SA, DeYoung B, Kytola V, Nykter M, Chen K, Levine EA, Staren ED, D'Agostino RB, Petro RM, Blackstock W, Powell BL, Abraham E, Pasche B, Zhang W. Circulating mutational portrait of cancer: manifestation of aggressive clonal events in both early and late stages. J Hematol Oncol. 2017 05 04; 10(1):100. PMID: 28472989.
      View in: PubMed
    13. Lencioni A, Hutchins L, Annis S, Chen W, Ermisoglu E, Feng Z, Mack K, Simpson K, Lane C, Topaloglu U. An adverse event capture and management system for cancer studies. BMC Bioinformatics. 2015; 16 Suppl 13:S6. PMID: 26424052.
      View in: PubMed
    14. Bian J, Xie M, Hogan W, Hutchins L, Topaloglu U, Lane C, Holland J, Wells T. CLARA: an integrated clinical research administration system. J Am Med Inform Assoc. 2014 Oct; 21(e2):e369-73. PMID: 24778201.
      View in: PubMed
    15. Hudson CL, Topaloglu U, Bian J, Hogan W, Kieber-Emmons T. Automated Tools for Clinical Research Data Quality Control using NCI Common Data Elements. AMIA Jt Summits Transl Sci Proc. 2014; 2014:60-9. PMID: 25717402.
      View in: PubMed
    16. Bian J, Xie M, Topaloglu U, Hudson T, Eswaran H, Hogan W. Social network analysis of biomedical research collaboration networks in a CTSA institution. J Biomed Inform. 2014 Dec; 52:130-40. PMID: 24560679.
      View in: PubMed
    17. Brochhausen M, Fransson MN, Kanaskar NV, Eriksson M, Merino-Martinez R, Hall RA, Norlin L, Kjellqvist S, Hortlund M, Topaloglu U, Hogan WR, Litton JE. Developing a semantically rich ontology for the biobank-administration domain. J Biomed Semantics. 2013 Oct 08; 4(1):23. PMID: 24103726.
      View in: PubMed
    18. Bian J, Xie M, Topaloglu U, Cisler JM. A probabilistic model of functional brain connectivity network for discovering novel biomarkers. AMIA Jt Summits Transl Sci Proc. 2013; 2013:21-5. PMID: 24303289.
      View in: PubMed
    19. Bian J, Topaloglu U, Yu F. Towards Large-scale Twitter Mining for Drug-related Adverse Events. SHB12 (2012). 2012 Oct 29; 2012:25-32. PMID: 28967001.
      View in: PubMed
    20. Yip V, Mete M, Topaloglu U, Kockara S. Concept Discovery for Pathology Reports using an N-gram Model. Summit Transl Bioinform. 2010 Mar 01; 2010:43-7. PMID: 21347147.
      View in: PubMed
    21. Mete M, Hennings L, Spencer HJ, Topaloglu U. Automatic identification of angiogenesis in double stained images of liver tissue. BMC Bioinformatics. 2009 Oct 08; 10 Suppl 11:S13. PMID: 19811678.
      View in: PubMed
    22. Bian J, Topaloglu U, Lane C. EIR: enterprise imaging repository, an alternative imaging archiving and communication system. Conf Proc IEEE Eng Med Biol Soc. 2009; 2009:2168-71. PMID: 19963537.
      View in: PubMed
    Topaloglu's Networks
    Click the "See All" links for more information and interactive visualizations!
    Concepts Expand Description
    See all (90) concept(s)
    _
    Co-Authors Expand Description
    See all (39) people
    _
    Similar People Expand Description
    See all (60) people
    _
    Same Department Expand Description
    Search Department
    Physical Neighbors Expand Description
    _